基本情况

舒龙飞，湖北黄冈人，九三学社社员，中山大学逸仙学者，教授，博士生导师，广东省杰出青年基金、美国生命科学基金获得者?；窆噬缁嵝园⒚装脱Щ崆嗄杲讨敖盜nternational Dictyostelium Junior Faculty award（2024年）、广东省环境科学学会生态环境青年科技奖（2024年）等奖励。

课题组聚焦环境阿米巴研究、形成了独具特色的学术标签。研究体系获国家级及国际科研计划持续资助，主持了2项国家自然科学基金，以及广东省杰青、美国生命科学基金、欧洲进化学会等7项国内外项目。发表SCI论文83篇，H指数29。其中一作/通讯37篇（中科院一区26篇，自然指数论文10篇），包括ISME J.（2篇），Environ. Sci. Technol.（5篇），Water Res.（2篇），eLife（1篇）等领域重要学术期刊。现任国际水协会（IWA）水生物安全中国委员会委员，欧洲环境、生态与可持续发展华人学会青年理事，担任BMC Microbiology（JCR Q1）编委，《水生生物学报》青年编委。担任ISME J.、PNAS、ES&T、Water Res.等杂志审稿人，参与中国、波兰、瑞典等国内外基金项目评审。

 

研究方向

围绕原生动物阿米巴开展环境生物学相关研究，主要关注以下问题：

  • 方法：分离培养、检测、物种和遗传资源库等技术问题；
  • 原理：共生、捕食、协同进化等理论问题；
  • 应用：生物安全、生物控制、生态修复等应用问题。

 

 

课题组专门致力于环境阿米巴研究，目标成为特色鲜明、在国内外有一定知名度的阿米巴实验室?；队曰肪场⑸?、微生物、环境工程、进化、生物学等学科感兴趣的本科生、硕士、博士、博士后与研究员加盟。

我们的团队互相尊重、高效友爱、灵魂有趣。

 

联系方式

-地址：广州市大学城外环东路132号中山大学环境科学与工程学院

-邮编：510006

-Email：shulf@mail.sysu.edu.cn

 

工作经历

2025 - 至今，中山大学，教授

2024 - 至今，中山大学，逸仙学者

2018 - 2025，中山大学，“百人计划”副教授

2016 - 2018，华盛顿大学-圣路易斯，美国生命科学基金会Fellow

2015 - 2016，华盛顿大学--圣路易斯，博士后

 

教育经历

2011 - 2015，苏黎世联邦理工学院，环境系统科学系，博士

2008 - 2011，深圳大学，生化与分子生物学，硕士

2004 - 2008，深圳大学，生物技术，学士

 

主持的科研项目

  • 2023 – 2026：广东省杰出青年基金项目，主持
  • 2022 – 2024：中山大学“青年拔尖科研人才”培育项目，主持
  • 2021 – 2023：广州市应用基础研究项目，主持
  • 2020 – 2023：国家自然科学基金面上项目（31970384），主持
  • 2020 – 2022：国家自然科学基金青年项目（41907021），主持
  • 2019 – 2020：中央高?；疽滴穹亚嗄昱嘤钅?，主持
  • 2018 – 2020：中山大学“百人计划”启动项目，主持
  • 2016 – 2019：Proto-farming and the carried microbiome in a social amoeba, Life Sciences Research Foundation (LSRF, 生命科学基金会, 美国)，主持
  • 2013 – 2014：Popularizing Evolution in China, European Society for Evolutionary Biology (ESEB, 欧洲进化学会).（主持）

 

参与的科研项目

  • 2011 - 2014：瑞士自然科学基金，参与

 

讲授课程

中山大学：走进环境微生物：从入门到实践

中山大学：环境生态工程

中山大学：创新研究与训练

中山大学：环境生态技术综合实验

华盛顿大学-圣路易斯：Bio 4935

 

代表性论文

  1. Yijing Shi, Lu Ma, Min Zhou, Zhili He, Yuanchen Zhao, Junyue Hong, Xinyue Zou, Lin Zhang, Longfei Shu*. Copper stress shapes the dynamic behavior of amoeba and its associated bacteria. The ISME Journal, 2024, 18(1), wrae100.
  2. Longfei Shu*, Bojie Zhang, David Queller, Joan Strassmann. Burkholderia bacteria use chemotaxis to find social amoeba Dictyostelium discoideum hosts. The ISME Journal, 2018, 12:1977-1993.
  3. Yijing Shi, Minxi Liang, Jiaxiong Zeng, Zihe Wang, Lin Zhang, Zhili He, Mengyuan Li, Longfei Shu*, Guangguo Ying. Soil amoebae are unexpected hotspots of environmental antibiotics and antibiotic resistance genes. Environmental Science & Technology, 2024, 58 (49), 21475-21488.
  4. Yingwen Mai, Jianyi Zheng, Jiaxiong Zeng, Zihe Wang, Fei Liu, Lu Ma, Min Zhou, Shanshan Zhao, Bo Wu, Cheng Wang, Qingyun Yan, Zhili He, Longfei Shu*. Protozoa as Hotspots for Potential Pathogens in the Drinking Water of a Subtropical Megacity: Diversity, Treatment, and Health Risk. Environmental Science & Technology, 2023, 57(15): 6108-6118.
  5. Siyi Zhang, Zhenzhen He, Chenyuan Wu, Zihe Wang, Yingwen Mai, Ruiwen Hu, Xiaojie Zhang, Wei Huang, Yuehui Tian, Dehua Xia, Cheng Wang, Qingyun Yan, Zhili He*, Longfei Shu*. 2022. Complex Bilateral Interactions Determine the Fate of Polystyrene Micro-and Nanoplastics and Soil Protists: Implications from a Soil Amoeba. Environmental Science & Technology, 56(8): 4936-4949.
  6. Huang Yu#, Zhenzhen He#, Zhili He, Qingyun Yan*, Longfei Shu*. Soil amoebae affect iron and chromium reduction through preferential predation between two metal-reducing bacteria. Environmental Science & Technology, 2022, 56, 12, 9052–9062.
  7. Chao Jin, Lingan Zhao, Weigao Zhao, Luting Wang, Shishu Zhu, Zihan Xiao, Yijun Mo, Miaoyue Zhang, Longfei Shu*, Rongliang Qiu*. 2021. Transport and Retention of Free-Living Amoeba Spores in Porous Media: Effects of Operational Parameters and Extracellular Polymeric Substances. Environmental Science & Technology, 2021, 55(13): 8709-8720.
  8. Liping Wang, Yingwen Mai, Shenzhou Li, Longfei Shu*, Jingyun Fang*. Efficient inactivation of amoeba spores and their intraspore bacteria by solar/chlorine: Kinetics and mechanisms. Water Research, 2023,242: 120288.
  9. Yingxue Xuan, Yingwen Mai, Yunqiu Xu, Jianyi Zheng, Zhili He, Longfei Shu*, Yingjie Cao*. Enhanced microbial nitrification-denitrification processes in a subtropical metropolitan river network. Water Research, 2022, 222: 118857.
  10. Longfei Shu#, Debra A Brock#, Katherine S Geist, Jacob W Miller, David C Queller, Joan E Strassmann, Susanne DiSalvo. Symbiont location, host fitness, and possible coadaptation in a symbiosis between social amoebae and bacteria.eLife, 2018, 7: e42660.

 

所有论文

2025

  1. Yuanchen Zhao, Lin Zhang, Zihe Wang, Chenyuan Wu, Fei Liu, Longfei Shu*. Exploring the mechanisms of cadmium tolerance and bioaccumulation in a soil amoeba. Science of The Total Environment, 2025, 965, 178637.
  2. Yuehui Tian, Lin Zhang, Zihe Wang, Zhili He, Longfei Shu*. Light affects host-symbiont dynamics in the non-photosynthetic social amoeba symbiosis, Ecology and Evolution, 2025.
  3. Fei Liu, Jiaxiong Zeng, Jijuan Ding, Cheng Wang, Zhili He, Zhiwei Liu, Longfei Shu*. Microbially-driven phosphorus cycling and its coupling mechanisms with nitrogen cycling in mangrove sediments. Science of The Total Environment, 2025, 958, 178118.
  4. Jijuan Ding, Fei Liu, Jiaxiong Zeng, Hang Gu, Jing Huang, Bo Wu, Longfei Shu, Qingyun Yan, Zhili He, Cheng Wang. Depth heterogeneity of lignin-degrading microbiome and organic carbon processing in mangrove sediments. npj Biofilms and Microbiomes, 2025, 11(1), 5.

2024

  1. Yijing Shi, Minxi Liang, Jiaxiong Zeng, Zihe Wang, Lin Zhang, Zhili He, Mengyuan Li, Longfei Shu*, Guangguo Ying. Soil amoebae are unexpected hotspots of environmental antibiotics and antibiotic resistance genes. Environmental Science & Technology, 2024, 58 (49), 21475-21488.
  2. Huinan Zhao, Jianyi Zheng, Wei Huang, Zhenzhen He, Fan Huang, Lin Zhang, Tao Zhong, Yadi Li, Dehua Xia, Longfei Shu*, Chun He*. “Nano knife”for efficient piezocatalytic inactivation of amoeba spores and their intracellular bacteria: Synergetic effect between physical damage and chemical oxidation. Journal of Hazardous Materials, 2024, 480, 136387.
  3. Yijing Shi, Lu Ma, Min Zhou, Zhili He, Yuanchen Zhao, Junyue Hong, Xinyue Zou, Lin Zhang, Longfei Shu*. Copper stress shapes the dynamic behavior of amoeba and its associated bacteria. The ISME Journal, 2024, 18(1), wrae100.
  4. Fei Liu, Jijuan Ding, Jiaxiong Zeng, Cheng Wang, Bo Wu, Qingyun Yan, Zhili He*, Longfei Shu*. Mangrove sediments are environmental hotspots for pathogenic protists. Journal of Hazardous Materials, 2024, 467: 133643.
  5. Min Zhou, Lu Ma, Zihe Wang, Shicheng Li, Yijun Cai, Meicheng Li, Lin Zhang, Cheng Wang, Bo Wu, Qingyun Yan, Zhili He, Longfei Shu*. Nano-and microplastics drive the dynamic equilibrium of amoeba-associated bacteria and antibiotic resistance genes. Journal of Hazardous Materials, 2024, 476, 134958.
  6. Wei Huang, Yuanchen Zhao, Lin Zhang, Yikun Shi, Zihe Wang, Yingwen Mai, Longfei Shu*. Soil physical structure drives N-glycan mediated trophic interactions in soil amoebae: Mechanisms and environmental implications. Science of The Total Environment, 2024, 906: 167509.
  7. Lu Ma, Lin Zhang, Siyi Zhang, Min Zhou, Wei Huang, Xinyue Zou, Zhili He, Longfei Shu*. Soil protists are more resilient to the combined effect of microplastics and heavy metals than bacterial communities. Science of The Total Environment, 2024, 906: 167645.
  8. Xueqin Yang, Yijing Shi, Guangguo Ying, Mengyuan Li, Zhili He, Longfei Shu*. Cooperation among nitrifying microorganisms promotes the irreversible biotransformation of sulfamonomethoxine. Science of The Total Environment, 2024, 923: 171395.
  9. Zhenyu Huang, Longfei Shu, Zhili He, Qingyun Yan. Community Coalescence under Variable Hydrochemical Conditions of the Chesapeake Bay Shaped Bacterial Diversity and Functional Traits. Environmental Research, 2024, 119272.
  10. Xueqin Yang, Yongjie Wu, Longfei Shu, Hang Gu, Fei Liu, Jijuan Ding, Jiaxiong Zeng, Cheng Wang, Zhili He, Meiying Xu, Feifei Liu, Xiafei Zheng, Bo Wu. Unraveling the important role of comammox Nitrospira to nitrification in the coastal aquaculture system. Frontiers in Microbiology, 2024, 15: 1355859.
  11. Jijuan Ding, Fei Liu, Jiaxiong Zeng, Hang Gu, Dandan Zhang, Xueqin Yang, Bo Wu, Longfei Shu, Zhili He, Cheng Wang. Homologous recombination and gene‐specific selection co‐shape the vertical nucleotide diversity of mangrove sediment microbial populations. Ecology and Evolution, 2024, 14(7), e70040.

2023

  1. Yingwen Mai, Jianyi Zheng, Jiaxiong Zeng, Zihe Wang, Fei Liu, Lu Ma, Min Zhou, Shanshan Zhao, Bo Wu, Cheng Wang, Qingyun Yan, Zhili He, Longfei Shu*. Protozoa as Hotspots for Potential Pathogens in the Drinking Water of a Subtropical Megacity: Diversity, Treatment, and Health Risk. Environmental Science & Technology, 2023, 57(15): 6108-6118.
  2. Liping Wang, Yingwen Mai, Shenzhou Li, Longfei Shu*, Jingyun Fang*. Efficient inactivation of amoeba spores and their intraspore bacteria by solar/chlorine: Kinetics and mechanisms. Water Research, 2023,242: 120288.
  3. Zihe Wang, Wei Huang, Yingwen Mai, Yuehui Tian, Bo Wu, Cheng Wang, Qingyun Yan, Zhili He, Longfei Shu*. Environmental stress promotes the persistence of facultative bacterial symbionts in amoebae. Ecology and Evolution, 2023, 13 (3), e9899.
  4. Zihe Wang, Wei Huang, Zhiwei Liu, Jiaxiong Zeng, Zhili He, Longfei Shu*. The neonicotinoid insecticide imidacloprid has unexpected effects on the growth and development of soil amoebae. Science of The Total Environment, 2023, 869: 161884.
  5. Liping Wang, Yingwen Mai, Shenzhou Li, Longfei Shu, Jingyun Fang. Breakpoint Chlorination Enhances the Disinfection of Amoeba Spores and Their Intraspore Bacteria. Environmental Science & Technology Letters, 2023, 10(3): 267-273.
  6. Xiaoli Yu, Qichao Tu, Jihua Liu, Yisheng Peng, Cheng Wang, Fanshu Xiao, Yingli Lian, Xueqin Yang, Ruiwen Hu, Huang Yu, Lu Qian, Daoming Wu, Ziying He, Longfei Shu, Qiang He, Yun Tian, Faming Wang, Shanquan Wang, Bo Wu, Zhijian Huang, Jianguo He, Qingyun Yan, Zhili He. Environmental selection and evolutionary process jointly shape genomic and functional profiles of mangrove rhizosphere microbiomes. mLife, 2023, 2(3), 253-266.
  7. Jiaxiong Zeng, Yu Pan, Ruiwen Hu, Fei Liu, Hang Gu, Jijuan Ding, Songfeng Liu, Shengwei Liu, Xueqin Yang, Yisheng Peng, Yun Tian, Qiang He, Yongjie Wu, Qingyun Yan, Longfei Shu, Zhili He*, Cheng Wang*. The vertically-stratified resistomes in mangrove sediments was driven by the bacterial diversity. Journal of Hazardous Materials, 2023, 131974.
  8. Lu Qian, Xiaoli Yu, Hang Gu, Fei Liu, Yijun Fan, Cheng Wang, Qiang He, Yun Tian, Yisheng Peng, Longfei Shu, Shanquan Wang, Zhijian Huang, Qingyun Yan, Jianguo He, Guangli Liu, Qichao Tu, Zhili He. Vertically stratified methane, nitrogen and sulphur cycling and coupling mechanisms in mangrove sediment microbiomes. Microbiome, 2023, 11(1): 1-19.
  9. Meng-Yuan Li, Run-Dong Zhang, Yi-Xing Lin, Qi-Wen Li, Qiu-Yue Zhao, Zong-Xi Zhao, Zhong-Ming Ling, Longfei Shu, Min Zhang, Li-Xin Hu, Yi-Jing Shi, Guang-Guo Ying. Biotransformation of sulfamonomethoxine in a granular sludge system: Pathways and mechanisms. Chemosphere, 2023, 313: 137508.
  10. Erxin Su, Yongjie Wu, Pubo Chen, Huang Yu, Shengwei Liu, Hongtian Luo, Yufeng Yang, Cheng Wang, Longfei Shu, Bo Wu, Zhili He, Qingyun Yan. Dietary selenium regulates the diversity and stability of microbial communities in stomach and intestine of rabbitfish (Siganus oramin). Aquaculture, 2023, 563: 738979.
  11. Min Zhou, Xiaotong Guan, Ting Deng, Ruiwen Hu, Lu Qian, Xueqin Yang, Bo Wu, Juan Li, Qiang He, Longfei Shu, Qingyun Yan, Zhili He. Synthetic phylogenetically diverse communities promote denitrification and stability. Environmental Research, 2023, 231: 116184.
  12. Ruiwen Hu, Songfeng Liu, Haiming Zhao, Zhigang Wang, Longfei Shu, Jiaxiong Zeng, Quanying Cai, Cehui Mo, Zhili He, Cheng Wang. Temporal microbial succession drives phase-dependent kinetics of di (2-ethylhexyl) phthalate biodegradation in soil. Biology and Fertility of Soils, 2023, 1-18.
  13. Bo Wu, Xiaotong Guan, Ting Deng, Xueqin Yang, Juan Li, Min Zhou, Cheng Wang, Shanquan Wang, Qingyun Yan, Longfei Shu, Qiang He, Zhili He. Synthetic Denitrifying Communities Reveal a Positive and Dynamic Biodiversity-Ecosystem Functioning Relationship during Experimental Evolution. Microbiology Spectrum, 2023, e04528-22.
  14. Xiaoli Yu, Lu Qian, Qichao Tu, Yisheng Peng, Cheng Wang, Daoming Wu, Ziying He, Longfei Shu, Qiang He, Yun Tian, Kedong Yin, Shanquan Wang, Qingyun Yan, Qiuping Zhong, Zhili He. Chemoautotrophic sulphur oxidizers dominate microbial necromass carbon formation in coastal blue carbon ecosystems. Functional Ecology, 2023, 37(10), 2634-2651.

2022

  1. Siyi Zhang, Zhenzhen He, Chenyuan Wu, Zihe Wang, Yingwen Mai, Ruiwen Hu, Xiaojie Zhang, Wei Huang, Yuehui Tian, Dehua Xia, Cheng Wang, Qingyun Yan, Zhili He*, Longfei Shu*. Complex Bilateral Interactions Determine the Fate of Polystyrene Micro-and Nanoplastics and Soil Protists: Implications from a Soil Amoeba. Environmental Science & Technology, 2022, 56(8): 4936-4949.
  2. Huang Yu#, Zhenzhen He#, Zhili He, Qingyun Yan*, Longfei Shu*. Soil amoebae affect iron and chromium reduction through preferential predation between two metal-reducing bacteria. Environmental Science & Technology, 2022, 56, 12, 9052–9062.
  3. Zhenzhen He; Ningchao Zheng; Lin Zhang; Yuehui Tian; Zhuofeng Hu*; Longfei Shu*. Efficient inactivation of intracellular bacteria in dormant amoeba spores by FeP. Journal of Hazardous Materials, 2022, 425, 127996.
  4. Chenyuan Wu; Yuanqing Chao; Longfei Shu*; Rongliang Qiu*. Interactions Between Soil Protists and Pollutants: An Unsolved Puzzle. Journal of Hazardous Materials, 2022, 429, 128279.
  5. Yuehui Tian, Tao Peng, Zhenzhen He, Luting Wang, Xurui Zhang, Zhili He, Longfei Shu*. Symbiont-Induced Phagosome Changes Rather than Extracellular Discrimination Contribute to the Formation of Social Amoeba Farming Symbiosis. Microbiology Spectrum, 2022, e01727-21.
  6. Yingxue Xuan, Yingwen Mai, Yunqiu Xu, Jianyi Zheng, Zhili He, Longfei Shu*, Yingjie Cao*. Enhanced microbial nitrification-denitrification processes in a subtropical metropolitan river network. Water Research, 2022, 222: 118857.
  7. Xiafei Zheng, Zhili He, Cheng Wang, Qingyun Yan*, Longfei Shu*. Evaluation of different primers of the 18S rRNA gene to profile amoeba communities in environmental samples. Water Biology and Security, 2022, 100057.
  8. Dandan Zhang, Mingyue Li, Yuchun Yang, Huang Yu, Fanshu Xiao, Chengzhi Mao, Jie Huang, Yuhe Yu, Yunfeng Wang, Bo Wu, Cheng Wang, Longfei Shu, Zhili He, Qingyun Yan. Nitrite and nitrate reduction drive sediment microbial nitrogen cycling in a eutrophic lake. Water Research, 2022, 118637.
  9. Mengge Fan, Longfei Shu, Xinran Zhang, Miao Yu, Yongting Du, Junlang Qiu, Xin Yang. Synergistic cytotoxicity of binary combinations of inorganic and organic disinfection byproducts assessed by real-time cell analysis. Journal of Environmental Sciences. 2022, 117, 222-231.
  10. Jiaxiong Zeng, Qichao Tu, Xiaoli Yu, Lu Qian, Cheng Wang, Longfei Shu, Fei Liu, Shengwei Liu, Zhijian Huang, Jianguo He, Qingyun Yan*, Zhili He*. PCycDB: a comprehensive and accurate database for fast analysis of phosphorus cycling genes. Microbiome, 2022, 10(1): 101.
  11. Chao Jin, Yijun Mo, Lingan Zhao, Zihan Xiao, Shishu Zhu, Zhenzhen He, Zijian Chen, Miaoyue Zhang, Longfei Shu, Rongliang Qiu. Host–Endosymbiont Relationship Impacts the Retention of Bacteria-Containing Amoeba Spores in Porous Media. Environmental Science & Technology, 2022, 56(17): 12347-12357.
  12. Wu, Bo; Zhou, Luhong; Liu, Shangshi; Liu, Feifei; Saleem, Muhammad; Han, Xingguo; Shu, Longfei; Yu, Xiaoli; Hu, Ruiwen; He, Zhili. Biogeography of soil protistan consumer and parasite is contrasting and linked to microbial nutrient mineralization in forest soils at a wide-scale. Soil Biology and Biochemistry, 2022, 165, 108513.
  13. Huang Yu, Xizhe Yan, Wanlin Weng, Sihan Xu, Guizhi Xu, Tianyuan Gu, Xiaotong Guan, Shengwei Liu, Pubo Chen, Yongjie Wu, Fanshu Xiao, Cheng Wang, Longfei Shu, Bo Wu, Dongru Qiu, Zhili He, Qingyun Yan. Extracellular proteins of Desulfovibrio vulgaris as adsorbents and redox shuttles promote biomineralization of antimony. Journal of Hazardous Materials, 2022, 426, 127795.
  14. Lu Qian, Xiaoli Yu, Jiayin Zhou, Hang Gu, Jijuan Ding, Yisheng Peng, Qiang He, Yun Tian, Jihua Liu, Shanquan Wang, Cheng Wang, Longfei Shu, Qingyun Yan, Jianguo He, Guangli Liu, Qichao Tu, Zhili He. MCycDB: a curated database for comprehensively profiling methane cycling processes of environmental microbiomes. Molecular Ecology Resources, 2022, 22(5): 1803-1823.
  15. Zhuoyun Tang, Ran Yin, Wei Qu, Huadan Liu, Huijun Luo, Dehua Xia, Yajing Huang, Longfei Shu, Chun He. 2022. Flower Pollen-Based Photosensitization Process for Enhanced Solar Disinfection of Drinking Water: Reactor Design and Inactivation Mechanisms. ACS ES&T Engineering, 2022, 2 (4), 629-641.
  16. Huang Yu, Qiuping Zhong, Yisheng Peng, Xiafei Zheng, Fanshu Xiao, Bo Wu, Xiaoli Yu, Zhiwen Luo, Longfei Shu, Cheng Wang, Qingyun Yan, Zhili He. Environmental Filtering by pH and Salinity Jointly Drives Prokaryotic Community Assembly in Coastal Wetland Sediments. Frontiers in Marine Science, 2022, 1980.
  17. Fanshu Xiao, Wengen Zhu, Yuhe Yu, Jie Huang, Juan Li, Zhili He, Jianjun Wang, Huaqun Yin, Huang Yu, Shengwei Liu, Pubo Chen, Zhijian Huang, Jianguo He, Cheng Wang, Longfei Shu, Qingyun Yan. Interactions and Stability of Gut Microbiota in Zebrafish Increase with Host Development. Microbiology Spectrum, 2022, e01696-21.
  18. Xueqin Yang, Xiaoli Yu, Qiang He, Ting Deng, Xiaotong Guan, Yingli Lian, Kui Xu, Longfei Shu, Cheng Wang, Qingyun Yan, Yuchun Yang, Bo Wu, Zhili He. Niche differentiation among comammox (Nitrospira inopinata) and other metabolically distinct nitrifiers. Frontiers in Microbiology, 2022, 3368.
  19. Ruiwen Hu, Songfeng Liu, Muhammad Saleem, Zhiyao Xiong, Zhengyuan Zhou, Zhiwen Luo, Longfei Shu, Zhili He, Cheng Wang. Environmentally‐induced reconstruction of microbial communities alters particulate carbon flux of deep chlorophyll maxima in the South China sea. Functional Ecology, 2022, 36(10): 2493-2507.

2021

  1. Chao Jin, Lingan Zhao, Weigao Zhao, Luting Wang, Shishu Zhu, Zihan Xiao, Yijun Mo, Miaoyue Zhang, Longfei Shu*, Rongliang Qiu*. Transport and Retention of Free-Living Amoeba Spores in Porous Media: Effects of Operational Parameters and Extracellular Polymeric Substances. Environmental Science & Technology,2021, 55(13), 8709-8720.
  2. Zhenzhen He, Luting Wang, Yuexian Ge, Siyi Zhang, Yuehui Tiana, Xin Yang*, Longfei Shu*. Both viable and inactivated amoeba spores protect their intracellular bacteria from drinking water disinfection. Journal of Hazardous Materials, 2021, 417, 126006.
  3. Longfei Shu, Zhenzhen He, Xiaotong Guan, Xueqin Yang, Yuehui Tian, Siyi Zhang, Chenyuan Wu, Zhili He, Qingyun Yan, Cheng Wang*, Yijing Shi*. A dormant amoeba species can selectively sense and predate on different soil bacteria. Functional Ecology, 2021, 35(8): 1708-1721.(封面论文).
  4. Yijing Shi, David C. Queller, Yuehui Tian, Siyi Zhang, Qingyun Yan, Zhili He, Zhenzhen He, Chenyuan Wu, Cheng Wang*, Longfei Shu*. The ecology and evolution of amoeba-bacterium interactions. Applied and Environmental Microbiology, 2021, 87(2): e01866-20. (封面论文)
  5. Cheng Wang, Ruiwen Hu, PJ Strong, Wei Zhuang, Weiming Huang, Zhiwen Luo, Qingyun Yan, Zhili He, Longfei Shu*. Prevalence of Antibiotic Resistance Genes and Bacterial Pathogens along the Soil–Mangrove Root Continuum. Journal of Hazardous Materials, 2021, 408: 124985.
  6. Liping Wang, Chengsong Ye, Lizheng Guo, Chunyan Chen, Xiujuan Kong, Yaoqing Chen, Longfei Shu, Peng Wang, Xin Yu*, and Jingyun Fang*. Assessment of the UV/Chlorine Process in the Disinfection of Pseudomonas aeruginosa: Efficiency and Mechanism. Environmental Science & Technology, 2021, 55(13): 9221-9230.
  7. Ruiwen Hu, Haiming Zhao, Xihui Xu, Zhigang Wang, Ke Yue, Longfei Shu, Qingyun Yan, Bo Wu, Cehui Mo, Zhili He, ChengWang. Bacteria-driven phthalic acid ester biodegradation: Current status and emerging opportunities. Environment International, 2021, 154: 106560.
  8. Huang Yu, Xiafei Zheng, Wanlin Weng, Xizhe Yan, Pubo Chen, Xingyu Liu, Tao Peng, Qiuping Zhong, Kui Xu, Cheng Wang, Longfei Shu, Tony Yang, Fanshu Xiao, Zhili He, Qingyun Yan. Synergistic effects of antimony and arsenic contaminations on bacterial, archaeal and fungal communities in the rhizosphere of Miscanthus sinensis: Insights for nitrification and carbon mineralization. Journal of Hazardous Materials, 2021, 411, 125094.
  9. Huang Yu, Xingyu Liu, Chao Yang, Yisheng Peng, Xiaoli Yu, Hang Gu, Xiafei Zheng, Cheng Wang, Fanshu Xiao, Longfei Shu, Zhili He, Bo Wu, Qingyun Yan. Co-symbiosis of arbuscular mycorrhizal fungi (AMF) and diazotrophs promote biological nitrogen fixation in mangrove ecosystems. Soil Biology and Biochemistry, 2021, 161, 108382.
  10. Fanshu Xiao, Wengen Zhu, Yuhe Yu, Zhili He, Bo Wu, Cheng Wang, Longfei Shu, Xinghao Li, Huaqun Yin, Jianjun Wang, Philippe Juneau, Xiafei Zheng, Yongjie Wu, Juan Li, Xiaojuan Chen, Dongwei Hou, Zhijian Huang, Jianguo He, Guohuan Xu, Liwei Xie, Jie Huang, Qingyun Yan. 2021. Host development overwhelms environmental dispersal in governing the ecological succession of zebrafish gut microbiota. npj Biofilms and Microbiomes, 2021, 7(1): 5.
  11. Xiafei Zheng, Keke Zhang, Tony Yang, Zhili He, Longfei Shu, Fanshu Xiao, Yongjie Wu, Binhao Wang, Huang Yu, Qingyun Yan. Sediment resuspension drives protist metacommunity structure and assembly in grass carp (Ctenopharyngodon idella) aquaculture ponds. Science of the Total Environment, 2020, 764: 142840.
  12. Kui Xu, Zhou Li, Philippe Juneau, Fanshu Xiao, Yingli Lian, Wei Zhang, Longfei Shu, Haibo Jiang, Keke Zhang, Cheng Wang, Shanquan Wang, Qingyun Yan, Zhili He. Toxic and protective mechanisms of cyanobacterium Synechocystis sp. in response to titanium dioxide nanoparticles. Environmental Pollution, 2021, 274: 116508.
  13. Yuexian Ge, Xinran Zhang, Longfei Shu, Xin Yang. Kinetics and Mechanisms of Virus Inactivation by Chlorine Dioxide in Water Treatment: A Review. Bulletin of environmental contamination and toxicology, 2021, 106: 560-567.

2020

  1. Longfei Shu*, Xinye Qian, Debra A. Brock, Katherine S. Geist, David C. Queller, Joan E. Strassmann. Loss and resiliency of social amoeba symbiosis under simulated warming. Ecology and Evolution, 2020, 10: 13182-13189.
  2. Wu, Bo, Feifei Liu, Aifen Zhou, Juan Li, Longfei Shu, Megan L. Kempher, Xueqin Yang, Feiyan Pan, Grant M. Zane, Judy D. Wall, Joy D. Van Nostrand, Philippe Juneau, Shouwen Chen, Qingyun Yan, Jizhong Zhou, Zhili He. Experimental evolution reveals nitrate tolerance mechanisms in Desulfovibrio vulgaris. The ISME Journal, 2020, 14(11): 2862-2876.
  3. Wei Zhuang, Xiaoli Yu, Ruiwen Hu, Zhiwen Luo, Xingyu Liu, Xiafei Zheng, Fanshu Xiao, Yisheng Peng, Qiang He, Yun Tian,Tony Yang, Shanquan Wang, Longfei Shu, Qingyun Yan, Cheng Wang, Zhili He. Diversity, function and assembly of mangrove root-associated microbial communities at a continuous fine-scale. npj Biofilms and Microbiomes, 2020, 6(1): 52.
  4. Xiaoli Yu, Xueqin Yang, Yongjie Wu, Yisheng Peng, Tony Yang, Fanshu Xiao, Qiuping Zhong, Kui Xu, Longfei Shu, Qiang He, Yun Tian, Qingyun Yan, Cheng Wang, Bo Wu, Zhili He. Sonneratia apetala introduction alters methane cycling microbial communities and increases methane emissions in mangrove ecosystems. Soil Biology and Biochemistry, 2020, 144: 107775.
  5. Keke Zhang, Xiafei Zheng, Zhili He, Tony Yang, Longfei Shu, Fanshu Xiao, Yongjie Wu, Binhao Wang, Zhou Li, Pubo Chen, Qingyun Yan. Fish growth enhances microbial sulfur cycling in aquaculture pond sediments. Microbial Biotechnology, 2020, 13: 1597-1610.
  6. Yuexian Ge, Yu Lei, Xin Lei, Wenhui Gan, Longfei Shu, Xin Yang. Exploration of reaction rates of chlorine dioxide with tryptophan residue in oligopeptides and proteins. Journal of Environmental Sciences, 2020, 93: 129-136.
  7. Yongjie Wu, Fanshu Xiao, Cheng Wang, Longfei Shu, Xiafei Zheng, Kui Xu, Xiaoli Yu, Keke Zhang, Hongtian Luo, Yufeng Yang, Zhili He, Qingyun Yan. The Beta- Diversity of Siganus fuscescens-Associated Microbial Communities from Different Habitats Increases with Body Weight. Frontiers in Microbiology, 2020, 11: 1562.
  8. Huang Yu, Xizhe Yan, Xiafei Zheng, Kui Xu, Qiuping Zhong, Tony Yang, Feifei Liu, Cheng Wang, Longfei Shu, Zhili He, Fanshu Xiao, Qingyun Yan. Differential distribution of and similar biochemical responses to different species of arsenic and antimony in Vetiveria zizanioides. Environmental Geochemistry and Health, 2020, 42: 3995-4010.
  9. Zhou Li, Philippe Juneau, Yingli Lian, Wei Zhang, Shanquan Wang, Cheng Wang, Longfei Shu, Qingyun Yan, Zhili He, Kui Xu. Effects of Titanium Dioxide Nanoparticles on Photosynthetic and Antioxidative Processes of Scenedesmus obliquus. Plants, 2020, 9(12), 1748.
  10. Xiaoli Yu, Jiayin Zhou, Wen Song, Mengzhao Xu, Qiang He, Yisheng Peng, Yun Tian, Cheng Wang, Longfei Shu, Shanquan Wang, Qingyun Yan, Jihua Liu, Qichao Tu, Zhili He. SCycDB: A curated functional gene database for metagenomic profiling of sulphur cycling pathways. Molecular Ecology Resources. 2021, 21(3): 924-940.
  11. 彭涛, 张斯仪, 王璐婷, 何祯珍, 舒龙飞*.阿米巴-细菌互作：进化、生态与环境效应. 微生物学报 2020, 60: 864-874.

2018

  1. Longfei Shu#, Debra A Brock#, Katherine S Geist, Jacob W Miller, David C Queller, Joan E Strassmann, Susanne DiSalvo. Symbiont location, host fitness, and possible coadaptation in a symbiosis between social amoebae and bacteria.eLife, 2018, 7: e42660.
  2. Longfei Shu*, Bojie Zhang, David Queller, Joan Strassmann. Burkholderia bacteria use chemotaxis to find social amoeba Dictyostelium discoideum hosts. The ISME Journal, 2018, 12:1977-1993.
  3. Longfei Shu*, Jie Qiu and Katja R?s?nen. Do novo oviduct transcriptomics of the moor frog (Rana arvalis): a quest for maternal effect candidate genes. PeerJ, 2018, 6:e5452.

Before 2018

  1. Joan Strassmann and Longfei Shu. Ancient bacteria-amoeba relationships and pathogenic animal bacteria. PLOS Biology, 2017 15(5).
  2. Longfei Shu, Marc J-F Suter, Anssi Laurila and Katja R?s?nen. Molecular phenotyping of maternal egg jelly reveals parallel adaptive evolution to acidity in Rana arvalis and Rana temporaria. Molecular Ecology2016, 25(18):4564-4579.
  3. Longfei Shu, Anssi Laurila, and Katja R?s?nen. Acid stress mediated adaptive divergence in ion channel function during embryogenesis in Rana arvalis. Scientific Reports,2015,doi: 10.1038/srep14201.
  4. Longfei Shu, Marc J.-F. Suterand Katja R?s?nen. Evolution of egg coats: linking molecular biology and ecology. Molecular Ecology, 2015, 24: 4052-4073.
  5. Longfei Shu, Anssi Laurila, Marc J-F Suter and Katja R?s?nen. Mechanistic basis of adaptive maternal effects: egg jelly water balance mediates embryonic adaptation to acidity in Rana arvalis. Oecologia, 2015, 179(3):617-628.
  6. Hui Li, Li Zhang, Longfei Shu, Xiaoshan Zhuang, Yanmei Liu, Jun Chen, Zhangli Hu. Sustainable photosynthetic H2-production mediated by artificial miRNA silencing of OEE2 gene in green alga Chlamydomonas reinhardtii. International Journal of Hydrogen Energy, 2015, 40(16): 5609-5616.
  7. Longfei Shu and Zhangli Hu*. Characterization and differential expression of microRNAs elicited by sulfur deprivation in Chlamydomonas reinhardtii. BMC Genomics, 2012 13:108.
  8. 胡章立，舒龙飞，苟德明. 莱茵衣藻硫胁迫相关 microRNA 检测及其靶基因分析. 深圳大学学报: 理工版, 2011, 28(3): 237-242.
  9. Longfei Shu, Zhangli Hu*. Small silencing RNAs in Chlamydomonas reinhardtii. Minerva Biotecnologica, 2010, 22(1): 29-37.

 

人才培养

  • 毕业生主要就职于科研院所、国家机关、事业单位、央国企等。
  • 田跃辉，博士后，2022年入职广州大学副教授
  • 何祯珍，2019级研究生，国家奖学金（2021年度），美国乔治华盛顿大学读博
  • 张琳，2023届级本科生，校级优秀本科毕业论文
  • 郑坚仪，2023届级本科生，校级优秀毕业生
  • 指导本科生在ES&T、WR等杂志发表SCI论文十余篇